STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apau_0493KEGG: tai:Taci_0452 hypothetical protein; SPTR: D1B8T5 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1393). (182 aa)    
Predicted Functional Partners:
Apau_0494
L-carnitine dehydratase/bile acid-inducible protein F; COGs: COG1804 acyl-CoA transferase/carnitine dehydratase; InterPro IPR003673; KEGG: hla:Hlac_2154 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; SPTR: D1C9B3 Formyl-CoA transferase; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.
       0.773
Apau_0353
Protein of unknown function DUF988; COGs: COG4708 membrane protein; InterPro IPR010387; KEGG: tai:Taci_0260 protein of unknown function DUF988; PFAM: protein of unknown function DUF988; SPTR: D1B894 Putative uncharacterized protein; PFAM: QueT transporter.
  
     0.528
Apau_0495
Phosphate butyryltransferase; COGs: COG0280 Phosphotransacetylase; InterPro IPR012147:IPR014079:IPR002505; KEGG: tai:Taci_0453 phosphate butyryltransferase; PFAM: phosphate acetyl/butaryl transferase; PRIAM: Phosphate butyryltransferase; SPTR: D1B8T6 Phosphate butyryltransferase; TIGRFAM: phosphate butyryltransferase; PFAM: Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate butyryltransferase.
       0.521
Apau_0191
GHMP kinase domain protein; COGs: COG4542 Protein involved in propanediol utilization and related protein (includes coumermycin biosynthetic protein) possible kinase; InterPro IPR006204:IPR013750:IPR020568; KEGG: tai:Taci_0066 GHMP kinase; PFAM: GHMP kinase domain protein; GHMP kinase; SPTR: D1B7Q3 GHMP kinase.
  
     0.430
Apau_0389
Proton-coupled thiamine transporter YuaJ; COGs: COG3859 membrane protein; InterPro IPR012651; KEGG: tai:Taci_0275 proton-coupled thiamine transporter YuaJ; PFAM: thiamine transporter YuaJ; SPTR: D1B8A9 Proton-coupled thiamine transporter YuaJ; TIGRFAM: proton-coupled thiamine transporter YuaJ; PFAM: Thiamine transporter protein (Thia_YuaJ); TIGRFAM: probable proton-coupled thiamine transporter YuaJ.
  
     0.430
Your Current Organism:
Aminomonas paucivorans
NCBI taxonomy Id: 584708
Other names: A. paucivorans DSM 12260, Aminomonas paucivorans DSM 12260, Aminomonas paucivorans str. DSM 12260, Aminomonas paucivorans strain DSM 12260
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