STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apau_0622ABC transporter related protein; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003439:IPR003593:IPR017871; KEGG: mta:Moth_1423 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q2RIK3 ABC transporter related; PFAM: ABC transporter. (259 aa)    
Predicted Functional Partners:
Apau_0623
COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: mta:Moth_1424 transport system permease protein; PFAM: transport system permease protein; SPTR: Q2RIK2 Transport system permease protein; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.992
Apau_0621
Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: mta:Moth_1419 periplasmic binding protein; PFAM: periplasmic binding protein; SPTR: Q2RIK7 Periplasmic binding protein; PFAM: Periplasmic binding protein.
 
 0.979
Apau_0441
COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: avn:Avin_26440 iron(III) ABC transporter-permease protein; PFAM: transport system permease protein; SPTR: C7IBG4 Transport system permease protein; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.967
Apau_0633
COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: mbu:Mbur_0497 ABC Fe3+-siderophore transporter, inner membrane subunit; PFAM: transport system permease protein; SPTR: Q12YJ6 Iron complex/Vitamin B12 ABC transporter permease protein; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.965
Apau_0439
Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491:IPR000169; KEGG: mta:Moth_1422 periplasmic binding protein; PFAM: periplasmic binding protein; SPTR: Q2RIK4 Periplasmic binding protein; PFAM: Periplasmic binding protein.
 0.935
Apau_0618
Radical SAM domain protein; COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR007197; KEGG: ppd:Ppro_1469 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SPTR: A1AP15 Radical SAM domain protein; PFAM: Radical SAM superfamily.
 
 0.931
Apau_0634
Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: pct:PC1_2847 periplasmic binding protein; PFAM: periplasmic binding protein; SPTR: C9PAB0 ABC-transporter periplasmic-binding component; PFAM: Periplasmic binding protein.
 
 0.931
Apau_1847
COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: tai:Taci_0526 transport system permease protein; PFAM: transport system permease protein; SPTR: D1B909 Transport system permease protein; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.907
Apau_0117
COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: mac:MA0951 hemin permease; PFAM: transport system permease protein; SPTR: Q8TS54 Hemin permease; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.898
Apau_0260
COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: rrs:RoseRS_3088 transport system permease protein; PFAM: transport system permease protein; SPTR: A5UXU8 Transport system permease protein; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.874
Your Current Organism:
Aminomonas paucivorans
NCBI taxonomy Id: 584708
Other names: A. paucivorans DSM 12260, Aminomonas paucivorans DSM 12260, Aminomonas paucivorans str. DSM 12260, Aminomonas paucivorans strain DSM 12260
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