STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apau_0822KEGG: tai:Taci_1360 hypothetical protein; SPTR: D1B6F0 Putative uncharacterized protein. (56 aa)    
Predicted Functional Partners:
Apau_0280
KEGG: swo:Swol_2185 hypothetical protein; SPTR: Q0AUX8 Putative uncharacterized protein.
  
  
 0.637
Apau_0823
Protein of unknown function DUF554; COGs: COG1811 Uncharacterized membrane protein possible Na+ channel or pump; InterPro IPR007563; KEGG: dvl:Dvul_1184 hypothetical protein; PFAM: protein of unknown function DUF554; SPTR: C1TPW9 Uncharacterized membrane protein, possible Na+ channel or pump; PFAM: Protein of unknown function (DUF554).
       0.557
Apau_0824
KEGG: shw:Sputw3181_2951 cytochrome c biogenesis protein, transmembrane region; SPTR: A1RM73 Cytochrome c biogenesis protein, transmembrane region; PFAM: Cytochrome C biogenesis protein transmembrane region.
       0.486
Apau_0825
KEGG: pdi:BDI_3507 hypothetical protein; SPTR: C3Q422 Putative uncharacterized protein.
       0.482
Your Current Organism:
Aminomonas paucivorans
NCBI taxonomy Id: 584708
Other names: A. paucivorans DSM 12260, Aminomonas paucivorans DSM 12260, Aminomonas paucivorans str. DSM 12260, Aminomonas paucivorans strain DSM 12260
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.