STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apau_1063KEGG: dsh:Dshi_0470 sulphur oxidation protein SoxZ; SPTR: A8LNR0 Sulphur oxidation protein SoxZ. (84 aa)    
Predicted Functional Partners:
Apau_1062
COGs: COG4372 Uncharacterized protein with the myosin-like domain; KEGG: tai:Taci_0658 uncharacterized protein with myosin-like protein domain; SPTR: D1B9E1 Uncharacterized protein with myosin-like protein domain; PFAM: Protein of unknown function (DUF3084).
       0.778
Apau_1064
InterPro IPR000182:IPR016181; KEGG: tai:Taci_0659 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: D1B9E2 GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family.
       0.776
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
       0.540
Apau_1066
COGs: COG1040 amidophosphoribosyltransferase; InterPro IPR000836; KEGG: tai:Taci_0661 phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: C1TLD8 Predicted amidophosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain.
       0.476
Apau_1061
Plasmid stabilization system; InterPro IPR007712; KEGG: geo:Geob_0186 plasmid stabilization system; PFAM: plasmid stabilization system; SPTR: C0XQS2 Plasmid stabilization system protein; manually curated; PFAM: Plasmid stabilisation system protein.
       0.446
Apau_1067
KEGG: tai:Taci_0662 hypothetical protein; SPTR: D1B9E5 Putative uncharacterized protein.
       0.431
Apau_1060
Hypothetical protein; KEGG: npu:Npun_R1756 prevent-host-death family protein; SPTR: Q2IUQ3 Aminotransferase.
       0.430
Apau_1059
DNA polymerase beta domain protein region; COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: lch:Lcho_0357 DNA polymerase beta subunit; PFAM: DNA polymerase beta domain protein region; SPTR: B1XWA5 DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase domain.
       0.403
Your Current Organism:
Aminomonas paucivorans
NCBI taxonomy Id: 584708
Other names: A. paucivorans DSM 12260, Aminomonas paucivorans DSM 12260, Aminomonas paucivorans str. DSM 12260, Aminomonas paucivorans strain DSM 12260
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