STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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[Homology]
Score
Apau_1081Pseudaminic acid CMP-transferase; COGs: COG1083 CMP-N-acetylneuraminic acid synthetase; InterPro IPR020039:IPR003329; KEGG: rhi:NGR_b09470 RkpN, acylneuraminate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; SPTR: Q071F1 RkpN, acylneuraminate cytidylyltransferase; TIGRFAM: pseudaminic acid CMP-transferase; PFAM: Cytidylyltransferase; TIGRFAM: pseudaminic acid CMP-transferase. (236 aa)    
Predicted Functional Partners:
Apau_1084
COGs: COG2089 Sialic acid synthase; InterPro IPR013132:IPR013974:IPR006190:IPR013785; KEGG: tai:Taci_0643 N-acylneuraminate-9-phosphate synthase; PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; PRIAM: N-acylneuraminate-9-phosphate synthase; SPTR: D1B9C6 N-acylneuraminate-9-phosphate synthase; PFAM: SAF domain; NeuB family.
 
 
 0.947
Apau_1814
COGs: COG2089 Sialic acid synthase; InterPro IPR013132:IPR020007:IPR013785:IPR006190; KEGG: sru:SRU_0605 sialic acid synthase; PFAM: N-acetylneuraminic acid synthase domain; PRIAM: N-acylneuraminate-9-phosphate synthase; SPTR: A4BMG3 N-acetylneuraminic acid synthase; TIGRFAM: N-acetylneuraminate synthase; PFAM: NeuB family; TIGRFAM: N-acetylneuraminate synthase.
 
 
 0.903
Apau_1080
UDP-N-acetylglucosamine 4,6-dehydratase; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR020025:IPR003869:IPR016040; KEGG: mmw:Mmwyl1_3560 polysaccharide biosynthesis protein CapD; PFAM: polysaccharide biosynthesis protein CapD; SPTR: C1TLC7 Predicted nucleoside-diphosphate sugar epimerase; TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase; PFAM: Polysaccharide biosynthesis protein; TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase.
 
  
 0.878
Apau_1082
Pseudaminic acid biosynthesis-associated methylase; InterPro IPR020027:IPR013217; KEGG: mhu:Mhun_3095 hypothetical protein; PFAM: Methyltransferase type 12; SPTR: Q2FTR2 Putative uncharacterized protein; TIGRFAM: pseudaminic acid biosynthesis-associated methylase; TIGRFAM: pseudaminic acid biosynthesis-associated methylase.
 
     0.800
Apau_1083
N-acetyl sugar amidotransferase; InterPro IPR020022; KEGG: cla:Cla_1328 pseudaminic acid biosynthesis protein PseA; SPTR: C7GBG6 Flagellin modification protein, PseA; TIGRFAM: N-acetyl sugar amidotransferase; TIGRFAM: N-acetyl sugar amidotransferase.
 
     0.720
Apau_0894
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; COGs: COG1778 Low specificity phosphatase (HAD superfamily); InterPro IPR010023; KEGG: tai:Taci_1289 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; SPTR: D1B679 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family.
 
 
  0.608
Apau_1086
COGs: COG3980 Spore coat polysaccharide biosynthesis protein predicted glycosyltransferase; KEGG: tai:Taci_0645 spore coat polysaccharide biosynthesis protein predicted glycosyltransferase-like protein; SPTR: D1B9C8 Spore coat polysaccharide biosynthesis protein predicted glycosyltransferase-like protein.
 
   
 0.597
Apau_1089
UDP-4-keto-6-deoxy-N-acetylglucosamine4-aminotra nsferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterProIPR020026:IPR000653:IPR015424:IPR015421:IPR 015422; KEGG: tai:Taci_0680 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: D1B9G3 DegT/DnrJ/EryC1/StrS aminotransferase; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; Belongs to the DegT [...]
 
  
 0.590
Apau_1079
InterPro IPR005186; KEGG: tai:Taci_0671 hypothetical protein; PFAM: flagellar protein FlaG protein; SPTR: D1B9F4 Putative uncharacterized protein; PFAM: FlaG protein.
       0.536
Apau_1815
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR003331:IPR020004; KEGG: hch:HCH_04836 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; SPTR: Q2SCU4 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing.
 
  
 0.536
Your Current Organism:
Aminomonas paucivorans
NCBI taxonomy Id: 584708
Other names: A. paucivorans DSM 12260, Aminomonas paucivorans DSM 12260, Aminomonas paucivorans str. DSM 12260, Aminomonas paucivorans strain DSM 12260
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