node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Apau_1335 | Apau_1930 | Apau_1335 | Apau_1930 | COGs: COG0539 Ribosomal protein S1; InterPro IPR016027:IPR012340:IPR003029:IPR000110; KEGG: tai:Taci_1027 RNA binding S1 domain protein; PFAM: RNA binding S1 domain protein; SPTR: D1B5G8 RNA binding S1 domain protein; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1. | COGs: COG0050 GTPase - translation elongation factors; InterProIPR009001:IPR009000:IPR000795:IPR004541:IPR 005225:IPR004161:IPR004160; KEGG: tai:Taci_1515 translation elongation factor Tu; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein; SPTR: D1B5X7 Translation elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; trans [...] | 0.973 |
Apau_1335 | frr | Apau_1335 | Apau_1164 | COGs: COG0539 Ribosomal protein S1; InterPro IPR016027:IPR012340:IPR003029:IPR000110; KEGG: tai:Taci_1027 RNA binding S1 domain protein; PFAM: RNA binding S1 domain protein; SPTR: D1B5G8 RNA binding S1 domain protein; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1. | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | 0.527 |
Apau_1335 | pyrH | Apau_1335 | Apau_1163 | COGs: COG0539 Ribosomal protein S1; InterPro IPR016027:IPR012340:IPR003029:IPR000110; KEGG: tai:Taci_1027 RNA binding S1 domain protein; PFAM: RNA binding S1 domain protein; SPTR: D1B5G8 RNA binding S1 domain protein; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.415 |
Apau_1335 | rplD | Apau_1335 | Apau_1641 | COGs: COG0539 Ribosomal protein S1; InterPro IPR016027:IPR012340:IPR003029:IPR000110; KEGG: tai:Taci_1027 RNA binding S1 domain protein; PFAM: RNA binding S1 domain protein; SPTR: D1B5G8 RNA binding S1 domain protein; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1. | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | 0.997 |
Apau_1335 | rplL | Apau_1335 | Apau_1923 | COGs: COG0539 Ribosomal protein S1; InterPro IPR016027:IPR012340:IPR003029:IPR000110; KEGG: tai:Taci_1027 RNA binding S1 domain protein; PFAM: RNA binding S1 domain protein; SPTR: D1B5G8 RNA binding S1 domain protein; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1. | LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.982 |
Apau_1335 | rplM | Apau_1335 | Apau_1935 | COGs: COG0539 Ribosomal protein S1; InterPro IPR016027:IPR012340:IPR003029:IPR000110; KEGG: tai:Taci_1027 RNA binding S1 domain protein; PFAM: RNA binding S1 domain protein; SPTR: D1B5G8 RNA binding S1 domain protein; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.990 |
Apau_1335 | rplV | Apau_1335 | Apau_1637 | COGs: COG0539 Ribosomal protein S1; InterPro IPR016027:IPR012340:IPR003029:IPR000110; KEGG: tai:Taci_1027 RNA binding S1 domain protein; PFAM: RNA binding S1 domain protein; SPTR: D1B5G8 RNA binding S1 domain protein; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1. | LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.988 |
Apau_1335 | rpsB | Apau_1335 | Apau_1161 | COGs: COG0539 Ribosomal protein S1; InterPro IPR016027:IPR012340:IPR003029:IPR000110; KEGG: tai:Taci_1027 RNA binding S1 domain protein; PFAM: RNA binding S1 domain protein; SPTR: D1B5G8 RNA binding S1 domain protein; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1. | COGs: COG0052 Ribosomal protein S2; InterPro IPR005706:IPR001865:IPR018130; KEGG: tai:Taci_0742 ribosomal protein S2; PFAM: ribosomal protein S2; SPTR: D1B9M2 Ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; Belongs to the universal ribosomal protein uS2 family. | 0.991 |
Apau_1335 | tsf | Apau_1335 | Apau_1162 | COGs: COG0539 Ribosomal protein S1; InterPro IPR016027:IPR012340:IPR003029:IPR000110; KEGG: tai:Taci_1027 RNA binding S1 domain protein; PFAM: RNA binding S1 domain protein; SPTR: D1B5G8 RNA binding S1 domain protein; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1. | Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.985 |
Apau_1335 | tuf | Apau_1335 | Apau_1644 | COGs: COG0539 Ribosomal protein S1; InterPro IPR016027:IPR012340:IPR003029:IPR000110; KEGG: tai:Taci_1027 RNA binding S1 domain protein; PFAM: RNA binding S1 domain protein; SPTR: D1B5G8 RNA binding S1 domain protein; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1. | Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.973 |
Apau_1930 | Apau_1335 | Apau_1930 | Apau_1335 | COGs: COG0050 GTPase - translation elongation factors; InterProIPR009001:IPR009000:IPR000795:IPR004541:IPR 005225:IPR004161:IPR004160; KEGG: tai:Taci_1515 translation elongation factor Tu; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein; SPTR: D1B5X7 Translation elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; trans [...] | COGs: COG0539 Ribosomal protein S1; InterPro IPR016027:IPR012340:IPR003029:IPR000110; KEGG: tai:Taci_1027 RNA binding S1 domain protein; PFAM: RNA binding S1 domain protein; SPTR: D1B5G8 RNA binding S1 domain protein; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1. | 0.973 |
Apau_1930 | rplD | Apau_1930 | Apau_1641 | COGs: COG0050 GTPase - translation elongation factors; InterProIPR009001:IPR009000:IPR000795:IPR004541:IPR 005225:IPR004161:IPR004160; KEGG: tai:Taci_1515 translation elongation factor Tu; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein; SPTR: D1B5X7 Translation elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; trans [...] | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | 0.987 |
Apau_1930 | rplL | Apau_1930 | Apau_1923 | COGs: COG0050 GTPase - translation elongation factors; InterProIPR009001:IPR009000:IPR000795:IPR004541:IPR 005225:IPR004161:IPR004160; KEGG: tai:Taci_1515 translation elongation factor Tu; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein; SPTR: D1B5X7 Translation elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; trans [...] | LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.976 |
Apau_1930 | rplM | Apau_1930 | Apau_1935 | COGs: COG0050 GTPase - translation elongation factors; InterProIPR009001:IPR009000:IPR000795:IPR004541:IPR 005225:IPR004161:IPR004160; KEGG: tai:Taci_1515 translation elongation factor Tu; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein; SPTR: D1B5X7 Translation elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; trans [...] | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.986 |
Apau_1930 | rplV | Apau_1930 | Apau_1637 | COGs: COG0050 GTPase - translation elongation factors; InterProIPR009001:IPR009000:IPR000795:IPR004541:IPR 005225:IPR004161:IPR004160; KEGG: tai:Taci_1515 translation elongation factor Tu; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein; SPTR: D1B5X7 Translation elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; trans [...] | LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.988 |
Apau_1930 | rpsB | Apau_1930 | Apau_1161 | COGs: COG0050 GTPase - translation elongation factors; InterProIPR009001:IPR009000:IPR000795:IPR004541:IPR 005225:IPR004161:IPR004160; KEGG: tai:Taci_1515 translation elongation factor Tu; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein; SPTR: D1B5X7 Translation elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; trans [...] | COGs: COG0052 Ribosomal protein S2; InterPro IPR005706:IPR001865:IPR018130; KEGG: tai:Taci_0742 ribosomal protein S2; PFAM: ribosomal protein S2; SPTR: D1B9M2 Ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; Belongs to the universal ribosomal protein uS2 family. | 0.987 |
Apau_1930 | tsf | Apau_1930 | Apau_1162 | COGs: COG0050 GTPase - translation elongation factors; InterProIPR009001:IPR009000:IPR000795:IPR004541:IPR 005225:IPR004161:IPR004160; KEGG: tai:Taci_1515 translation elongation factor Tu; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein; SPTR: D1B5X7 Translation elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; trans [...] | Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.998 |
frr | Apau_1335 | Apau_1164 | Apau_1335 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | COGs: COG0539 Ribosomal protein S1; InterPro IPR016027:IPR012340:IPR003029:IPR000110; KEGG: tai:Taci_1027 RNA binding S1 domain protein; PFAM: RNA binding S1 domain protein; SPTR: D1B5G8 RNA binding S1 domain protein; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1. | 0.527 |
frr | pyrH | Apau_1164 | Apau_1163 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.991 |
frr | rplD | Apau_1164 | Apau_1641 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | 0.964 |