STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apau_1547InterPro IPR005242; KEGG: tai:Taci_1084 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: D1B5M5 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein. (335 aa)    
Predicted Functional Partners:
Apau_0808
KEGG: tai:Taci_0483 hypothetical protein; SPTR: D1B8W6 Putative uncharacterized protein.
  
     0.704
Apau_0948
KEGG: tai:Taci_1249 hypothetical protein; SPTR: D1B639 Putative uncharacterized protein.
  
     0.692
Apau_0952
OstA family protein; InterPro IPR005653; KEGG: tai:Taci_1245 OstA family protein; PFAM: OstA family protein; SPTR: D1B635 OstA family protein.
  
     0.632
Apau_1110
COGs: COG1466 DNA polymerase III delta subunit; InterPro IPR010372:IPR008921; KEGG: tai:Taci_0699 DNA polymerase III delta; PFAM: DNA polymerase III delta; SPTR: D1B9I2 DNA polymerase III delta; TIGRFAM: DNA polymerase III, delta subunit.
 
     0.604
Apau_2038
Conserved hypothetical protein; COGs: COG3857 ATP-dependent nuclease subunit B; KEGG: tai:Taci_1692 hypothetical protein; SPTR: C1TNK0 Putative uncharacterized protein.
  
     0.594
Apau_1481
Sporulation domain protein; InterPro IPR007730; KEGG: tai:Taci_0879 sporulation domain protein; PFAM: Sporulation domain protein; SPTR: D1BA09 Sporulation domain protein; PFAM: Sporulation related domain.
 
     0.593
Apau_1546
KEGG: tai:Taci_1083 hypothetical protein; SPTR: D1B5M4 Putative uncharacterized protein.
       0.582
Apau_0915
S-layer domain protein; InterPro IPR001119; KEGG: tai:Taci_1274 S-layer domain protein; PFAM: S-layer domain protein; SPTR: D1B664 S-layer domain protein; PFAM: S-layer homology domain.
  
     0.559
Apau_1319
Type II and III secretion system protein; COGs: COG1450 Type II secretory pathway component PulD; InterPro IPR011662:IPR005644:IPR004846:IPR001775; KEGG: tai:Taci_1043 type II and III secretion system protein; PFAM: type II and III secretion system protein; Secretin/TonB short domain; NolW domain protein; SPTR: D1B5I4 Type II and III secretion system protein; PFAM: Bacterial type II and III secretion system protein.
  
     0.559
Apau_1505
InterPro IPR002842; KEGG: tai:Taci_0855 H+transporting two-sector ATPase E subunit; PFAM: H+transporting two-sector ATPase E subunit; SPTR: D1B9Y5 H+transporting two-sector ATPase E subunit; PFAM: ATP synthase (E/31 kDa) subunit.
  
     0.552
Your Current Organism:
Aminomonas paucivorans
NCBI taxonomy Id: 584708
Other names: A. paucivorans DSM 12260, Aminomonas paucivorans DSM 12260, Aminomonas paucivorans str. DSM 12260, Aminomonas paucivorans strain DSM 12260
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