node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Apau_1619 | Apau_1624 | Apau_1619 | Apau_1624 | KOW domain protein; InterPro IPR005824; KEGG: tai:Taci_1161 hypothetical protein; PFAM: KOW domain protein; SPTR: D1B5V2 Putative uncharacterized protein; PFAM: KOW motif. | COGs: COG1841 Ribosomal protein L30/L7E; InterPro IPR005996:IPR000517:IPR016082:IPR018038; KEGG: tai:Taci_1166 ribosomal protein L30; PFAM: ribosomal protein L30; SPTR: D1B5V7 Ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle. | 0.999 |
Apau_1619 | infA | Apau_1619 | Apau_1618 | KOW domain protein; InterPro IPR005824; KEGG: tai:Taci_1161 hypothetical protein; PFAM: KOW domain protein; SPTR: D1B5V2 Putative uncharacterized protein; PFAM: KOW motif. | Bacterial translation initiation factor 1 (bIF-1); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | 0.984 |
Apau_1619 | rplD | Apau_1619 | Apau_1641 | KOW domain protein; InterPro IPR005824; KEGG: tai:Taci_1161 hypothetical protein; PFAM: KOW domain protein; SPTR: D1B5V2 Putative uncharacterized protein; PFAM: KOW motif. | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | 0.999 |
Apau_1619 | rplR | Apau_1619 | Apau_1626 | KOW domain protein; InterPro IPR005824; KEGG: tai:Taci_1161 hypothetical protein; PFAM: KOW domain protein; SPTR: D1B5V2 Putative uncharacterized protein; PFAM: KOW motif. | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
Apau_1619 | rpsB | Apau_1619 | Apau_1161 | KOW domain protein; InterPro IPR005824; KEGG: tai:Taci_1161 hypothetical protein; PFAM: KOW domain protein; SPTR: D1B5V2 Putative uncharacterized protein; PFAM: KOW motif. | COGs: COG0052 Ribosomal protein S2; InterPro IPR005706:IPR001865:IPR018130; KEGG: tai:Taci_0742 ribosomal protein S2; PFAM: ribosomal protein S2; SPTR: D1B9M2 Ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; Belongs to the universal ribosomal protein uS2 family. | 0.991 |
Apau_1619 | rpsD | Apau_1619 | Apau_1614 | KOW domain protein; InterPro IPR005824; KEGG: tai:Taci_1161 hypothetical protein; PFAM: KOW domain protein; SPTR: D1B5V2 Putative uncharacterized protein; PFAM: KOW motif. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.993 |
Apau_1619 | rpsE | Apau_1619 | Apau_1625 | KOW domain protein; InterPro IPR005824; KEGG: tai:Taci_1161 hypothetical protein; PFAM: KOW domain protein; SPTR: D1B5V2 Putative uncharacterized protein; PFAM: KOW motif. | SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.997 |
Apau_1619 | rpsK | Apau_1619 | Apau_1615 | KOW domain protein; InterPro IPR005824; KEGG: tai:Taci_1161 hypothetical protein; PFAM: KOW domain protein; SPTR: D1B5V2 Putative uncharacterized protein; PFAM: KOW motif. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.995 |
Apau_1619 | rpsM | Apau_1619 | Apau_1616 | KOW domain protein; InterPro IPR005824; KEGG: tai:Taci_1161 hypothetical protein; PFAM: KOW domain protein; SPTR: D1B5V2 Putative uncharacterized protein; PFAM: KOW motif. | SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.996 |
Apau_1619 | rpsO | Apau_1619 | Apau_1132 | KOW domain protein; InterPro IPR005824; KEGG: tai:Taci_1161 hypothetical protein; PFAM: KOW domain protein; SPTR: D1B5V2 Putative uncharacterized protein; PFAM: KOW motif. | SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.990 |
Apau_1624 | Apau_1619 | Apau_1624 | Apau_1619 | COGs: COG1841 Ribosomal protein L30/L7E; InterPro IPR005996:IPR000517:IPR016082:IPR018038; KEGG: tai:Taci_1166 ribosomal protein L30; PFAM: ribosomal protein L30; SPTR: D1B5V7 Ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle. | KOW domain protein; InterPro IPR005824; KEGG: tai:Taci_1161 hypothetical protein; PFAM: KOW domain protein; SPTR: D1B5V2 Putative uncharacterized protein; PFAM: KOW motif. | 0.999 |
Apau_1624 | infA | Apau_1624 | Apau_1618 | COGs: COG1841 Ribosomal protein L30/L7E; InterPro IPR005996:IPR000517:IPR016082:IPR018038; KEGG: tai:Taci_1166 ribosomal protein L30; PFAM: ribosomal protein L30; SPTR: D1B5V7 Ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle. | Bacterial translation initiation factor 1 (bIF-1); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | 0.998 |
Apau_1624 | rplD | Apau_1624 | Apau_1641 | COGs: COG1841 Ribosomal protein L30/L7E; InterPro IPR005996:IPR000517:IPR016082:IPR018038; KEGG: tai:Taci_1166 ribosomal protein L30; PFAM: ribosomal protein L30; SPTR: D1B5V7 Ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle. | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | 0.999 |
Apau_1624 | rplR | Apau_1624 | Apau_1626 | COGs: COG1841 Ribosomal protein L30/L7E; InterPro IPR005996:IPR000517:IPR016082:IPR018038; KEGG: tai:Taci_1166 ribosomal protein L30; PFAM: ribosomal protein L30; SPTR: D1B5V7 Ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle. | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
Apau_1624 | rpsB | Apau_1624 | Apau_1161 | COGs: COG1841 Ribosomal protein L30/L7E; InterPro IPR005996:IPR000517:IPR016082:IPR018038; KEGG: tai:Taci_1166 ribosomal protein L30; PFAM: ribosomal protein L30; SPTR: D1B5V7 Ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle. | COGs: COG0052 Ribosomal protein S2; InterPro IPR005706:IPR001865:IPR018130; KEGG: tai:Taci_0742 ribosomal protein S2; PFAM: ribosomal protein S2; SPTR: D1B9M2 Ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; Belongs to the universal ribosomal protein uS2 family. | 0.992 |
Apau_1624 | rpsD | Apau_1624 | Apau_1614 | COGs: COG1841 Ribosomal protein L30/L7E; InterPro IPR005996:IPR000517:IPR016082:IPR018038; KEGG: tai:Taci_1166 ribosomal protein L30; PFAM: ribosomal protein L30; SPTR: D1B5V7 Ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.995 |
Apau_1624 | rpsE | Apau_1624 | Apau_1625 | COGs: COG1841 Ribosomal protein L30/L7E; InterPro IPR005996:IPR000517:IPR016082:IPR018038; KEGG: tai:Taci_1166 ribosomal protein L30; PFAM: ribosomal protein L30; SPTR: D1B5V7 Ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle. | SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.998 |
Apau_1624 | rpsK | Apau_1624 | Apau_1615 | COGs: COG1841 Ribosomal protein L30/L7E; InterPro IPR005996:IPR000517:IPR016082:IPR018038; KEGG: tai:Taci_1166 ribosomal protein L30; PFAM: ribosomal protein L30; SPTR: D1B5V7 Ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.996 |
Apau_1624 | rpsM | Apau_1624 | Apau_1616 | COGs: COG1841 Ribosomal protein L30/L7E; InterPro IPR005996:IPR000517:IPR016082:IPR018038; KEGG: tai:Taci_1166 ribosomal protein L30; PFAM: ribosomal protein L30; SPTR: D1B5V7 Ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle. | SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.996 |
Apau_1624 | rpsO | Apau_1624 | Apau_1132 | COGs: COG1841 Ribosomal protein L30/L7E; InterPro IPR005996:IPR000517:IPR016082:IPR018038; KEGG: tai:Taci_1166 ribosomal protein L30; PFAM: ribosomal protein L30; SPTR: D1B5V7 Ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle. | SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.991 |