STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apau_1664Hypothetical protein; SPTR: Q9F1N4 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. (59 aa)    
Predicted Functional Partners:
Apau_1662
KEGG: chy:CHY_0839 hypothetical protein; SPTR: Q3ADU3 Conserved domain protein.
       0.773
Apau_1663
Type III restriction protein res subunit; COGs: COG1061 DNA or RNA helicase of superfamily II; InterPro IPR014021:IPR001650:IPR006935:IPR014001; KEGG: hoh:Hoch_0896 type III restriction protein res subunit; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: helicase domain protein; DEAD-like helicase; SPTR: C1TKV6 DNA/RNA helicase, superfamily II; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit.
       0.773
Apau_1665
InterPro IPR012337; KEGG: amr:AM1_4255 hypothetical protein; SPTR: C1TKV5 Putative uncharacterized protein.
       0.773
Apau_1666
Hypothetical protein; KEGG: ade:Adeh_3637 DNA polymerase III, subunits gamma and tau; SPTR: Q2IFP2 DNA polymerase III, subunits gamma and tau.
       0.773
Apau_1667
TOPRIM domain protein; COGs: COG4643 conserved hypothetical protein; InterPro IPR006171:IPR006154:IPR003593; KEGG: ddc:Dd586_3771 P4 alpha zinc-binding domain protein; PFAM: TOPRIM domain protein; SMART: Toprim sub domain protein; AAA ATPase; SPTR: C8QS02 P4 alpha zinc-binding domain protein; PFAM: Toprim domain.
       0.773
Apau_1668
KEGG: asu:Asuc_1218 hypothetical protein; SPTR: A6VNN3 Putative uncharacterized protein.
       0.773
Apau_1669
KEGG: fal:FRAAL0218 hypothetical protein; SPTR: Q0RU48 Putative uncharacterized protein.
       0.773
Apau_1670
Helix-turn-helix domain protein; InterPro IPR001387:IPR010982; KEGG: pay:PAU_00956 putative phage regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C7GH47 Putative transcriptional regulator; PFAM: Helix-turn-helix.
       0.773
Your Current Organism:
Aminomonas paucivorans
NCBI taxonomy Id: 584708
Other names: A. paucivorans DSM 12260, Aminomonas paucivorans DSM 12260, Aminomonas paucivorans str. DSM 12260, Aminomonas paucivorans strain DSM 12260
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.