STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Coexpression
Experiments
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Textmining
[Homology]
Score
Apau_1784Glycoside hydrolase family 57; COGs: COG1449 Alpha-amylase/alpha-mannosidase; InterPro IPR004300:IPR011330; KEGG: tai:Taci_0544 glycoside hydrolase family 57; PFAM: glycoside hydrolase family 57; SPTR: D1B927 Glycoside hydrolase family 57; PFAM: Glycosyl hydrolase family 57; Domain of unknown function (DUF3536). (791 aa)    
Predicted Functional Partners:
Apau_1785
COGs: COG0058 Glucan phosphorylase; InterPro IPR000811:IPR011834; KEGG: tai:Taci_0543 alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; PRIAM: Phosphorylase; SPTR: D1B926 Alpha-glucan phosphorylase; TIGRFAM: alpha-glucan phosphorylase; PFAM: Carbohydrate phosphorylase; TIGRFAM: alpha-glucan phosphorylases.
 
 0.932
glgA
Glycogen synthase (ADP-glucose); Synthesizes alpha-1,4-glucan chains using ADP-glucose.
  
 
 0.784
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
    
  0.666
Apau_2155
COGs: COG1640 4-alpha-glucanotransferase; InterPro IPR017853:IPR013781:IPR003385; KEGG: tai:Taci_0364 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77; PRIAM: 4-alpha-glucanotransferase; SPTR: D1B8J8 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase.
 
  
  0.608
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
    
 0.532
Apau_1783
COGs: COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism; InterPro IPR004358:IPR005467:IPR003594; KEGG: tai:Taci_0545 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: D1B928 Histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
       0.530
Apau_1811
Nucleotidyl transferase; COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); InterPro IPR000644:IPR005835; KEGG: sru:SRU_0607 putative mannose-1-phosphate guanyltransferase; PFAM: Nucleotidyl transferase; CBS domain containing protein; SPTR: Q2S4Y1 Putative mannose-1-phosphate guanyltransferase; PFAM: CBS domain; Nucleotidyl transferase.
    
 0.526
Apau_2397
HAD-superfamily hydrolase, subfamily IA, variant 3; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005833:IPR006402:IPR005834; KEGG: tai:Taci_1742 haloacid dehalogenase domain protein hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: D1B7G5 Haloacid dehalogenase domain protein hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
    
  0.480
Apau_1472
Amylo-alpha-16-glucosidase; COGs: COG3408 Glycogen debranching protein; InterPro IPR008928:IPR010401; KEGG: tai:Taci_0888 amylo-alpha-16-glucosidase; PFAM: Amylo-alpha-16-glucosidase; SPTR: D1BA18 Amylo-alpha-16-glucosidase; PFAM: Amylo-alpha-1,6-glucosidase; Glycogen debranching enzyme N terminal; TIGRFAM: glycogen debranching enzyme, archaeal type, putative.
  
 
 0.474
Apau_0178
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR013027:IPR004099:IPR016156:IPR001763; KEGG: tai:Taci_0103 pyridine nucleotide-disulphide oxidoreductase dimerization region; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SMART: Rhodanese domain protein; SPTR: D1B7U0 Pyridine nucleotide-disulphide oxidoreductase dimerization region; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Rhodanese-like domain; Pyridine nucleotide-disu [...]
    
  0.450
Your Current Organism:
Aminomonas paucivorans
NCBI taxonomy Id: 584708
Other names: A. paucivorans DSM 12260, Aminomonas paucivorans DSM 12260, Aminomonas paucivorans str. DSM 12260, Aminomonas paucivorans strain DSM 12260
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