STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Apau_1814COGs: COG2089 Sialic acid synthase; InterPro IPR013132:IPR020007:IPR013785:IPR006190; KEGG: sru:SRU_0605 sialic acid synthase; PFAM: N-acetylneuraminic acid synthase domain; PRIAM: N-acylneuraminate-9-phosphate synthase; SPTR: A4BMG3 N-acetylneuraminic acid synthase; TIGRFAM: N-acetylneuraminate synthase; PFAM: NeuB family; TIGRFAM: N-acetylneuraminate synthase. (357 aa)    
Predicted Functional Partners:
Apau_1815
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR003331:IPR020004; KEGG: hch:HCH_04836 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; SPTR: Q2SCU4 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing.
 
 0.987
Apau_1811
Nucleotidyl transferase; COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); InterPro IPR000644:IPR005835; KEGG: sru:SRU_0607 putative mannose-1-phosphate guanyltransferase; PFAM: Nucleotidyl transferase; CBS domain containing protein; SPTR: Q2S4Y1 Putative mannose-1-phosphate guanyltransferase; PFAM: CBS domain; Nucleotidyl transferase.
 
  
 0.967
Apau_1809
Acylneuraminate cytidylyltransferase; COGs: COG1083 CMP-N-acetylneuraminic acid synthetase; InterPro IPR003329; KEGG: gur:Gura_4089 acylneuraminate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; SPTR: A5G8W4 Acylneuraminate cytidylyltransferase; PFAM: Cytidylyltransferase.
 
 0.948
Apau_1813
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; COGs: COG1043 Acyl-(acyl carrier protein); InterPro IPR001451:IPR020019:IPR011004:IPR018357; KEGG: sru:SRU_0606 pilin glycosylation protein PglB; SPTR: Q2S4Y2 Pilin glycosylation protein PglB; TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; manually curated; TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
     0.927
Apau_1081
Pseudaminic acid CMP-transferase; COGs: COG1083 CMP-N-acetylneuraminic acid synthetase; InterPro IPR020039:IPR003329; KEGG: rhi:NGR_b09470 RkpN, acylneuraminate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; SPTR: Q071F1 RkpN, acylneuraminate cytidylyltransferase; TIGRFAM: pseudaminic acid CMP-transferase; PFAM: Cytidylyltransferase; TIGRFAM: pseudaminic acid CMP-transferase.
 
 
 0.903
Apau_1817
NAD-dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509:IPR016040; KEGG: pph:Ppha_0524 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: B4SDA9 NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family.
 
  
 0.888
Apau_1812
N-acetyl sugar amidotransferase; InterPro IPR020022; KEGG: vsa:VSAL_I0258 putative outer membrane protein; SPTR: B6EPC2 Putative outer membrane protein; TIGRFAM: N-acetyl sugar amidotransferase; TIGRFAM: N-acetyl sugar amidotransferase.
 
 
   0.850
Apau_0894
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; COGs: COG1778 Low specificity phosphatase (HAD superfamily); InterPro IPR010023; KEGG: tai:Taci_1289 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; SPTR: D1B679 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family.
   
 0.836
Apau_1816
DegT/DnrJ/EryC1/StrS aminotransferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653:IPR015421:IPR015422:IPR015424; KEGG: tnp:Tnap_0420 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: C7IB95 Glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.823
Apau_1086
COGs: COG3980 Spore coat polysaccharide biosynthesis protein predicted glycosyltransferase; KEGG: tai:Taci_0645 spore coat polysaccharide biosynthesis protein predicted glycosyltransferase-like protein; SPTR: D1B9C8 Spore coat polysaccharide biosynthesis protein predicted glycosyltransferase-like protein.
 
 
 0.768
Your Current Organism:
Aminomonas paucivorans
NCBI taxonomy Id: 584708
Other names: A. paucivorans DSM 12260, Aminomonas paucivorans DSM 12260, Aminomonas paucivorans str. DSM 12260, Aminomonas paucivorans strain DSM 12260
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