STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apau_1827Hypothetical protein; InterPro IPR003006; KEGG: cyh:Cyan8802_1485 hypothetical protein; SPTR: A3ZRZ7 Putative uncharacterized protein. (215 aa)    
Predicted Functional Partners:
Apau_1828
SMC domain protein; COGs: COG4637 ATPase; InterPro IPR014555:IPR003593:IPR003395; KEGG: mhu:Mhun_0146 ATPase-like; PFAM: SMC domain protein; SMART: AAA ATPase; SPTR: A3ZRZ8 ABC transport protein, ATP-binding subunit.
       0.784
Apau_1826
KEGG: scl:sce5020 hypothetical protein; SPTR: A9FL65 Putative uncharacterized protein.
       0.773
Apau_1825
Transferase hexapeptide repeat containing protein; COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl); InterPro IPR001451:IPR011004:IPR018357; KEGG: tai:Taci_0040 transferase hexapeptide repeat containing protein; PFAM: transferase hexapeptide repeat containing protein; SPTR: D1B7M7 Transferase hexapeptide repeat containing protein; PFAM: Bacterial transferase hexapeptide (three repeats).
       0.523
Apau_1830
ATPase; COGs: COG4637 ATPase; KEGG: ava:Ava_3860 ATPase-like; SPTR: C0GVE4 ATPase-like protein.
       0.502
Apau_1829
KEGG: dal:Dalk_3050 hypothetical protein; SPTR: C0GVE5 Putative uncharacterized protein; manually curated.
       0.478
Apau_1824
COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR003331; KEGG: tpt:Tpet_0300 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; PRIAM: UDP-N-acetylglucosamine 2-epimerase; SPTR: C1TR65 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
       0.402
Your Current Organism:
Aminomonas paucivorans
NCBI taxonomy Id: 584708
Other names: A. paucivorans DSM 12260, Aminomonas paucivorans DSM 12260, Aminomonas paucivorans str. DSM 12260, Aminomonas paucivorans strain DSM 12260
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.