STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apau_1838ROK family protein; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: tai:Taci_0535 ROK family protein; PFAM: ROK family protein; SPTR: D1B918 ROK family protein; PFAM: ROK family. (312 aa)    
Predicted Functional Partners:
Apau_2240
Mannose-6-phosphate isomerase, type 2; COGs: COG0836 Mannose-1-phosphate guanylyltransferase; InterProIPR011051:IPR014710:IPR006375:IPR005835:IPR 001538; KEGG: hmo:HM1_1237 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; PRIAM: Mannose-1-phosphate guanylyltransferase; SPTR: C1TKD3 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGR [...]
    
 0.893
pgi
COGs: COG0166 Glucose-6-phosphate isomerase; InterPro IPR001672:IPR018189; KEGG: tai:Taci_0794 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); PRIAM: Glucose-6-phosphate isomerase; SPTR: D1B9S4 Glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase; Belongs to the GPI family.
    
 0.886
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
 
 0.885
Apau_2191
Ketose-bisphosphate aldolase class-II; COGs: COG0191 Fructose/tagatose bisphosphate aldolase; InterPro IPR013785:IPR000771; KEGG: tai:Taci_0218 ketose-bisphosphate aldolase class-II; PFAM: ketose-bisphosphate aldolase class-II; SPTR: D1B854 Ketose-bisphosphate aldolase class-II; PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases.
    
 0.883
Apau_1587
Transketolase domain protein; COGs: COG0021 Transketolase; InterProIPR005474:IPR005475:IPR005476:IPR015941:IPR 009014; KEGG: tai:Taci_1130 transketolase central region; PFAM: Transketolase domain protein; Transketolase central region; SPTR: D1B5S1 Transketolase central region; PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain.
  
 
 0.876
Apau_0521
COGs: COG1109 Phosphomannomutase; InterProIPR005841:IPR016055:IPR016066:IPR005844:IPR 005845:IPR005846:IPR005843; KEGG: tai:Taci_0468 phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; PRIAM: Phosphomannomutase; SPTR: D1B8V1 Phosphomannomutase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain [...]
  
 
 0.863
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
    
  0.844
Apau_0810
COGs: COG3959 Transketolase N-terminal subunit; InterPro IPR005474:IPR018184; KEGG: tai:Taci_0485 transketolase; PFAM: Transketolase domain protein; SPTR: D1B8W8 Transketolase; PFAM: Transketolase, thiamine diphosphate binding domain.
    
 0.840
Apau_0811
COGs: COG3958 Transketolase C-terminal subunit; InterPro IPR009014:IPR005475:IPR005476:IPR015941; KEGG: tai:Taci_0486 transketolase domain protein; PFAM: Transketolase domain protein; Transketolase central region; SPTR: D1B8W9 Transketolase domain protein; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain.
     
 0.839
Apau_0921
COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR002220:IPR013785:IPR020625; KEGG: sti:Sthe_0488 dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; SPTR: D1C7U3 Dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase; Belongs to the DapA family.
 
 
 0.793
Your Current Organism:
Aminomonas paucivorans
NCBI taxonomy Id: 584708
Other names: A. paucivorans DSM 12260, Aminomonas paucivorans DSM 12260, Aminomonas paucivorans str. DSM 12260, Aminomonas paucivorans strain DSM 12260
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