STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apau_1896COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR018211:IPR001670; KEGG: csc:Csac_0407 alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase; SPTR: A4XGL1 Alcohol dehydrogenase; PFAM: Iron-containing alcohol dehydrogenase. (386 aa)    
Predicted Functional Partners:
Apau_0027
COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590:IPR016161:IPR012408:IPR016162; KEGG: rru:Rru_A0914 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: C1TM21 NAD-dependent aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family.
 0.966
Apau_0757
COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR017896:IPR011895:IPR002869:IPR009014:IPR 002880:IPR019752:IPR019456:IPR001450:IPR011766:IPR017900:I PR015941; KEGG: tai:Taci_1436 pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin iron-sulfur binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; SPTR: D1B6M5 Pyruvate [...]
  
 
 0.931
Apau_1001
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR019752:IPR002880:IPR002869:IPR009014; KEGG: tai:Taci_0614 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; SPTR: D1B997 Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductas [...]
  
 
 0.700
Apau_2419
COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016161:IPR016160:IPR016162:IPR015590; KEGG: dds:Ddes_1981 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; PRIAM: Aldehyde dehydrogenase (NAD(+)); SPTR: Q1JWW2 Aldehyde dehydrogenase (NAD+); PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
 
 0.692
Apau_0016
Dehydratase medium subunit; InterPro IPR003208:IPR010254; KEGG: dal:Dalk_4998 dehydratase medium subunit; PFAM: dehydratase medium subunit; SPTR: C1TM35 Dehydratase medium subunit; PFAM: Dehydratase medium subunit.
    
 0.674
Apau_0240
NADH dehydrogenase (quinone); COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterProIPR009737:IPR011538:IPR019554:IPR019575:IPR 001450:IPR017900:IPR001949:IPR012336:IPR017896:IPR012335; KEGG: tte:TTE0893 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Sucraseferredoxin family protein; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PRIAM: NADH dehydrogenase (quinone); SPTR: C1TS [...]
  
 
 0.670
Apau_0017
COGs: COG4910 Propanediol dehydratase small subunit; InterPro IPR003207; KEGG: tau:Tola_1688 dehydratase small subunit; PFAM: dehydratase small subunit; SPTR: C1TM34 Propanediol dehydratase, small subunit; PFAM: Dehydratase small subunit.
    
 0.668
Apau_0247
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein; COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterProIPR011538:IPR019554:IPR019575:IPR001450:IPR 017900:IPR001949:IPR012336:IPR017896:IPR012335; KEGG: tai:Taci_0149 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PRIAM: NADH dehydrogenase (quinone); SPTR: D1B7Y6 NADH dehydrogenase (Quinone [...]
  
 
 0.661
glgA
Glycogen synthase (ADP-glucose); Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.650
Apau_1895
NADPH-dependent FMN reductase; COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR005025; KEGG: mbn:Mboo_0650 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: A7I607 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase.
       0.645
Your Current Organism:
Aminomonas paucivorans
NCBI taxonomy Id: 584708
Other names: A. paucivorans DSM 12260, Aminomonas paucivorans DSM 12260, Aminomonas paucivorans str. DSM 12260, Aminomonas paucivorans strain DSM 12260
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