STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apau_2088KEGG: tai:Taci_0402 hypothetical protein; SPTR: D1B8N6 Putative uncharacterized protein. (160 aa)    
Predicted Functional Partners:
Apau_2087
Aminotransferase class I and II; COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterPro IPR015424:IPR004838:IPR015421:IPR004839; KEGG: tsi:TSIB_1326 putative histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; SPTR: C1TQJ0 PLP-dependent enzyme, histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase; PFAM: Aminotransferase class I and II.
       0.773
Apau_2089
InterPro IPR000620; KEGG: tai:Taci_0401 protein of unknown function DUF6 transmembrane; PFAM: protein of unknown function DUF6 transmembrane; SPTR: D1B8N5 Putative uncharacterized protein; PFAM: EamA-like transporter family.
       0.537
Apau_2085
KEGG: tai:Taci_0404 hypothetical protein; SPTR: D1B8N8 Putative uncharacterized protein.
       0.424
Apau_2086
InterPro IPR011470; KEGG: tai:Taci_0403 protein of unknown function DUF1576; PFAM: protein of unknown function DUF1576; SPTR: D1B8N7 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1576).
       0.424
Your Current Organism:
Aminomonas paucivorans
NCBI taxonomy Id: 584708
Other names: A. paucivorans DSM 12260, Aminomonas paucivorans DSM 12260, Aminomonas paucivorans str. DSM 12260, Aminomonas paucivorans strain DSM 12260
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.