STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Apau_2110Metal dependent phosphohydrolase; COGs: COG1639 signal transduction protein; InterPro IPR003607:IPR013976; KEGG: tai:Taci_0156 metal dependent phosphohydrolase; PFAM: Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region; SPTR: D1B7Z3 Metal dependent phosphohydrolase; PFAM: HDOD domain. (415 aa)    
Predicted Functional Partners:
Apau_2109
COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterProIPR003594:IPR011006:IPR009082:IPR008207:IPR 004358:IPR000160:IPR003661:IPR001789:IPR005467; KEGG: tai:Taci_0157 response regulator receiver modulated diguanylate cyclase; PFAM: GGDEF domain containing protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; Hpt domain protein; SMART: GGDEF domain containing protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SPTR: D1B7 [...]
 
 
  0.863
Apau_0456
Diguanylate cyclase with PAS/PAC sensor; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000014:IPR000700:IPR000160:IPR013656; KEGG: tai:Taci_1587 diguanylate cyclase with PAS/PAC sensor; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; SMART: GGDEF domain containing protein; PAS domain containing protein; SPTR: D1B717 Diguanylate cyclase with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.
  
  0.849
Apau_2164
COGs: COG0642 Signal transduction histidine kinase; InterProIPR003594:IPR011006:IPR009082:IPR008207:IPR 005467:IPR001789:IPR000014:IPR004358:IPR003661:IPR013656; KEGG: dma:DMR_28640 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; response regulator receiver; Hpt domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; SPTR: C4XHI1 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: [...]
   
 0.660
Apau_2111
KEGG: mla:Mlab_1323 hypothetical protein; SPTR: C0GVM8 Peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase.
       0.648
flgI
Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
     0.643
fliE
COGs: COG1677 Flagellar hook-basal body protein; InterPro IPR001624; KEGG: tai:Taci_1338 flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; SPTR: D1B6C8 Flagellar hook-basal body complex subunit FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE.
 
     0.629
Apau_0379
COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467:IPR004358:IPR003018:IPR000014:IPR 003661:IPR003594:IPR009082:IPR011006:IPR013656; KEGG: chl:Chy400_0428 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; PAS fold-4 domain protein; PRIAM: Histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; PAS domain containing protein; SPTR: B9LID2 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain; Histidine kina [...]
   
 0.614
Apau_0733
COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467:IPR001789:IPR000014:IPR000700:IPR 008207:IPR004358:IPR001610:IPR003661:IPR003594:IPR011006:I PR009082:IPR013655:IPR013767:IPR013656; KEGG: tai:Taci_1451 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; PAS fold-3 domain protein; response regulator receiver; Hpt domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC rep [...]
   
 0.610
Apau_2190
Putative PAS/PAC sensor protein; InterPro IPR011006:IPR001789:IPR000014:IPR013656; KEGG: mem:Memar_1158 putative PAS/PAC sensor protein; PFAM: PAS fold-4 domain protein; response regulator receiver; SMART: response regulator receiver; SPTR: C1TPJ4 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; TIGRFAM: PAS sensor protein; PFAM: Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box.
 
 
  0.576
Apau_2112
Metallophosphoesterase; InterPro IPR004843; KEGG: tai:Taci_0155 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: D1B7Z2 Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase.
 
     0.575
Your Current Organism:
Aminomonas paucivorans
NCBI taxonomy Id: 584708
Other names: A. paucivorans DSM 12260, Aminomonas paucivorans DSM 12260, Aminomonas paucivorans str. DSM 12260, Aminomonas paucivorans strain DSM 12260
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