STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apau_2217KEGG: tai:Taci_0354 hypothetical protein; SPTR: A1HM86 Putative uncharacterized protein; PFAM: Bacterial cellulose synthase subunit. (659 aa)    
Predicted Functional Partners:
Apau_2216
General secretory system II protein E domain protein; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR007831:IPR001173; KEGG: ttj:TTHA0743 glycosyltransferase related protein; PFAM: General secretory system II protein E domain protein; glycosyl transferase family 2; SPTR: Q5SKA5 Glycosyltransferase related protein; PFAM: GSPII_E N-terminal domain; Glycosyl transferase family 2.
       0.787
Apau_2215
KEGG: tro:trd_1272 hypothetical protein; SPTR: B9L1L2 Putative membrane protein.
       0.773
Apau_2218
Nucleotidyl transferase; COGs: COG0836 Mannose-1-phosphate guanylyltransferase; InterPro IPR005835:IPR001538; KEGG: hor:Hore_22860 mannose-1-phosphate guanylyltransferase (GDP); PFAM: Nucleotidyl transferase; mannose-6-phosphate isomerase type II; SPTR: B8D179 Mannose-1-phosphate guanylyltransferase (GDP); PFAM: Nucleotidyl transferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
       0.672
Apau_2219
Glycoside hydrolase family 5; InterPro IPR017853:IPR013781:IPR001547; KEGG: rca:Rcas_0182 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 5; SPTR: A7NFT5 Glycoside hydrolase family 5; PFAM: Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
       0.566
nfi
Endonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA.
       0.426
Your Current Organism:
Aminomonas paucivorans
NCBI taxonomy Id: 584708
Other names: A. paucivorans DSM 12260, Aminomonas paucivorans DSM 12260, Aminomonas paucivorans str. DSM 12260, Aminomonas paucivorans strain DSM 12260
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