STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apau_2355Hypothetical protein; InterPro IPR013838; KEGG: mca:MCA2834 hypothetical protein; SPTR: Q603H2 Putative uncharacterized protein. (188 aa)    
Predicted Functional Partners:
Apau_2354
Nuclease (SNase domain protein); COGs: COG1525 Micrococcal nuclease (thermonuclease) homologs; InterPro IPR016071:IPR006021; KEGG: tai:Taci_1722 nuclease (SNase domain protein); PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein); SPTR: D1B7E5 Nuclease (SNase domain protein); manually curated; PFAM: Staphylococcal nuclease homologue.
       0.773
Apau_2356
COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: tai:Taci_1723 cobyrinic acid ac-diamide synthase; PFAM: Cobyrinic acid ac-diamide synthase; SPTR: D1B7E6 Cobyrinic acid ac-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
       0.455
Apau_2357
Chromosome segregation DNA-binding protein; COGs: COG1475 transcriptional regulator protein; InterPro IPR003115:IPR004437; KEGG: tai:Taci_1724 ParB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; SPTR: D1B7E7 ParB-like partition protein; TIGRFAM: parB-like partition protein; PFAM: ParB-like nuclease domain; KorB domain; TIGRFAM: ParB-like partition proteins; Belongs to the ParB family.
       0.455
Apau_2358
Histidine triad (HIT) protein; COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR011146:IPR001310:IPR011151; KEGG: tai:Taci_1725 histidine triad (HIT) protein; PFAM: histidine triad (HIT) protein; SPTR: D1B7E8 Histidine triad (HIT) protein; PFAM: HIT domain.
       0.434
Apau_2359
Protein of unknown function UPF0029; COGs: COG1739 conserved hypothetical protein; InterPro IPR020568:IPR001498; KEGG: tai:Taci_1726 protein of unknown function UPF0029; PFAM: protein of unknown function UPF0029; SPTR: D1B7E9 Putative uncharacterized protein; PFAM: Uncharacterized protein family UPF0029; TIGRFAM: uncharacterized protein, YigZ family.
       0.434
Your Current Organism:
Aminomonas paucivorans
NCBI taxonomy Id: 584708
Other names: A. paucivorans DSM 12260, Aminomonas paucivorans DSM 12260, Aminomonas paucivorans str. DSM 12260, Aminomonas paucivorans strain DSM 12260
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