Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Apau_2425COGs: COG2059 Chromate transport protein ChrA; InterPro IPR003370; KEGG: tai:Taci_1752 chromate transporter; PFAM: Chromate transporter; SPTR: D1B7H5 Chromate transporter; PFAM: Chromate transporter. (175 aa)    
Predicted Functional Partners:
Apau_2426
COGs: COG2059 Chromate transport protein ChrA; InterPro IPR003370; KEGG: tai:Taci_1753 chromate transporter; PFAM: Chromate transporter; SPTR: D1B7H6 Chromate transporter; PFAM: Chromate transporter.
 
     0.949
Apau_2427
Methyl-accepting chemotaxis sensory transducer with Cache sensor; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR003660:IPR004010; KEGG: tai:Taci_0556 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: C1TNQ6 Methyl-accepting chemotaxis protein; PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.
       0.588
Apau_2424
COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594:IPR005467:IPR004358:IPR013656; KEGG: tai:Taci_1751 histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: D1B7H4 Histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: PAS domain S-box.
     
 0.578
Apau_2423
COGs: COG1428 Deoxynucleoside kinase; InterPro IPR002624; KEGG: nth:Nther_0678 deoxynucleoside kinase; PFAM: deoxynucleoside kinase; SPTR: B2A777 Deoxynucleoside kinase; PFAM: Deoxynucleoside kinase.
       0.423
Your Current Organism:
Aminomonas paucivorans
NCBI taxonomy Id: 584708
Other names: A. paucivorans DSM 12260, Aminomonas paucivorans DSM 12260, Aminomonas paucivorans str. DSM 12260, Aminomonas paucivorans strain DSM 12260
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