STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDC28_103475Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. (345 aa)    
Predicted Functional Partners:
EDC28_103477
Unannotated protein.
 0.997
EDC28_103476
Unannotated protein.
 0.997
EDC28_10680
Unannotated protein.
 
 0.979
EDC28_103473
Unannotated protein.
 
  
  0.913
EDC28_103474
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
    
0.835
EDC28_103472
Unannotated protein; Belongs to the glycosyl hydrolase 43 family.
 
     0.811
EDC28_103478
Unannotated protein; Converts alpha-aldose to the beta-anomer.
 
   
 0.775
EDC28_102482
Unannotated protein.
     
 0.639
EDC28_103479
Unannotated protein.
     
 0.634
EDC28_102130
Unannotated protein.
  
 
  0.599
Your Current Organism:
Gallaecimonas pentaromativorans
NCBI taxonomy Id: 584787
Other names: CECT 7479, DSM 21945, G. pentaromativorans, Gallaecimonas pentaromativorans Rodriguez-Blanco et al. 2010, gamma proteobacterium CEE_131, strain CEE_131
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.