STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDC28_11249Unannotated protein. (204 aa)    
Predicted Functional Partners:
EDC28_11250
Unannotated protein.
 
 
 0.991
EDC28_11247
Unannotated protein.
 
 0.979
EDC28_11248
Unannotated protein.
 
 0.971
EDC28_11246
Unannotated protein.
 
 0.961
EDC28_11327
Unannotated protein.
  
 
 0.916
EDC28_11251
Unannotated protein.
 
    0.875
EDC28_11252
Unannotated protein.
 
   
 0.840
EDC28_101526
Unannotated protein.
  
 0.813
EDC28_11323
Unannotated protein.
  
 0.812
EDC28_11245
Unannotated protein.
  
  
 0.790
Your Current Organism:
Gallaecimonas pentaromativorans
NCBI taxonomy Id: 584787
Other names: CECT 7479, DSM 21945, G. pentaromativorans, Gallaecimonas pentaromativorans Rodriguez-Blanco et al. 2010, gamma proteobacterium CEE_131, strain CEE_131
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.