STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR95_1097Hypothetical protein. (113 aa)    
Predicted Functional Partners:
yebZ
Copper resistance D family protein.
 
  
 0.920
DR95_96
sseB C-terminal domain protein.
  
     0.774
DR95_1927
yqjK-like family protein.
  
     0.769
tus
Rep_term_tus: DNA replication terminus site-binding protein.
  
     0.767
tomB
Biofilm formation regulator YbaJ family protein.
  
     0.766
DR95_972
Enterobacterial Ail/Lom family protein.
  
     0.764
ail-3
Attachment invasion locus protein.
  
     0.763
holE
DNA polymerase III subunit theta.
  
     0.760
holE-2
DNA polymerase III subunit theta.
  
     0.760
holE-3
DNA polymerase III subunit theta.
  
     0.759
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.