STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hicBHypothetical protein. (144 aa)    
Predicted Functional Partners:
hpmA
Hemolysin.
 
     0.645
yjcF
Acetyltransferase family protein.
  
     0.640
DR95_2847
Autotransporter beta-domain protein.
  
     0.636
prtA-2
Secreted protease A.
  
     0.633
DR95_1521
Hypothetical protein; adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein.
 
     0.585
qseG
yfhG lipofamily protein.
  
     0.578
DR95_1180
Hypothetical protein.
  
     0.570
DR95_3673
Bacterial Ig-like domain family protein.
 
     0.567
nlpE
nlpE N-terminal domain protein.
  
     0.544
DR95_2846
Chondroitin ABC endolyase 1; Endolytic, broad-specificity glycosaminoglycan lyase, which degrades the polysaccharides chondroitin, chondroitin-4-sulfate, chondroitin-6-sulfate, dermatan sulfate and to a lesser extent hyaluronan, by beta-elimination of 1,4-hexosaminidic bond to unsaturated tetrasaccharides and disaccharides. Is not active against keratan sulfate, heparan sulfate, and heparin. Is able to promote functional recovery in the injured central nervous system (CNS), via its role in the disruption of the normal organization of the extracellular matrix (ECM).
 
     0.535
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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