STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR95_1128Phosphoadenosine phosphosulfate reductase family protein. (396 aa)    
Predicted Functional Partners:
DR95_1129
parB-like nuclease domain protein.
 
 
 0.986
uspF_1
Universal stress family protein.
  
    0.632
dmsC_1
DMSO reductase anchor subunit family protein.
  
     0.523
DR95_1849
Putative oxidoreductase.
  
     0.504
scrY
Hypothetical protein; Maltoporin periplasmic N-terminal extension family protein.
  
     0.497
aphA
Class B acid phosphatase; Belongs to the class B bacterial acid phosphatase family.
  
     0.489
caiB
Carnitine CoA-transferase; Catalyzes the reversible transfer of the CoA moiety from gamma-butyrobetainyl-CoA to L-carnitine to generate L-carnitinyl-CoA and gamma-butyrobetaine. Is also able to catalyze the reversible transfer of the CoA moiety from gamma-butyrobetainyl-CoA or L- carnitinyl-CoA to crotonobetaine to generate crotonobetainyl-CoA. Belongs to the CoA-transferase III family. CaiB subfamily.
  
     0.460
DR95_857
lacY proton/sugar symporter family protein.
  
     0.460
DR95_2971
Hypothetical protein.
  
     0.453
recE
Putative exodeoxyribonuclease VIII.
  
     0.414
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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