STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR95_1180Hypothetical protein. (341 aa)    
Predicted Functional Partners:
DR95_1181
kilA-N domain protein.
       0.782
DR95_1162
proheadase_HK97: phage prohead protease, HK97 family.
   
    0.768
DR95_2782
proheadase_HK97: phage prohead protease, HK97 family.
   
    0.768
DR95_3058
Hypothetical protein.
  
     0.761
DR95_1643
Hypothetical protein.
  
     0.729
DR95_1182
Bacterial regulatory s, gntR family protein.
       0.724
DR95_1183
Hypothetical protein.
       0.720
qseG
yfhG lipofamily protein.
  
     0.720
DR95_1179
Phage antitermination Q family protein.
       0.697
DR95_857
lacY proton/sugar symporter family protein.
  
     0.693
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.