STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pqiB_1Mce related family protein. (550 aa)    
Predicted Functional Partners:
pqiA
pqiA_fam: integral membrane, PqiA family protein.
 
  
 0.959
DR95_1368
Hypothetical protein.
 
   
 0.950
yebS
Inner membrane protein yebS.
 
  
 0.817
rlmL
THUMP domain protein; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family.
       0.621
ccmA
ccmA: heme ABC exporter, ATP-binding protein CcmA.
       0.564
mlaD
Putative phospholipid ABC transporter-binding protein mlaD.
  
   
 0.533
DR95_1367
ASCH domain protein.
       0.527
mlaF
Putative phospholipid import ATP-binding protein MlaF.
     
 0.468
xylA_2
Hypothetical protein.
       0.405
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.