STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aphAClass B acid phosphatase; Belongs to the class B bacterial acid phosphatase family. (237 aa)    
Predicted Functional Partners:
ribE
ribE: riboflavin synthase, alpha subunit.
  
  
  0.912
hpaC
hpaC: 4-hydroxyphenylacetate 3-monooxygenase, reductase component.
     
  0.900
ribF
ribF: riboflavin biosynthesis protein RibF; Belongs to the ribF family.
     
  0.900
fre
NAD(P)H-flavin reductase.
     
  0.900
pmfA
Major fimbrial subunit.
  
     0.594
hybE
Hydrogenase-2 operon protein hybE.
  
     0.564
mukE
Chromosome partition protein mukE; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF.
 
     0.542
hybB
Putative membrane protein.
  
     0.539
DR95_2817
FHA domain protein.
  
     0.539
recE
Putative exodeoxyribonuclease VIII.
  
     0.533
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.