STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mlaAPutative phospholipid-binding lipoprotein mlaA. (245 aa)    
Predicted Functional Partners:
mlaC
Putative phospholipid-binding protein mlaC.
 
 
 
 0.944
ompD
Gram-negative porin family protein.
   
 
 0.885
mlaD
Putative phospholipid ABC transporter-binding protein mlaD.
 
   
 0.882
ompC
Gram-negative porin family protein.
   
 
 0.818
mlaE
Putative phospholipid ABC transporter permease protein mlaE.
 
   
 0.730
mlaF
Putative phospholipid import ATP-binding protein MlaF.
 
   
 0.668
mlaB
STAS domain protein.
 
   
 0.623
bamD
Hypothetical protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamA, the core component of the assembly machinery.
  
  
 0.589
lptD
LPS-assembly protein lptD; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
 
  
 0.587
lptF
Lipopolysaccharide export system permease protein lptF.
  
   
 0.525
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.