STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dpsDNA protection during starvation protein; Belongs to the Dps family. (168 aa)    
Predicted Functional Partners:
clpS
ATP-dependent Clp protease adaptor ClpS family protein; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
   
 
 0.812
copA
ATPase-IB1_Cu: copper-translocating P-type ATPase.
  
  
 0.672
tsaA_1
Hypothetical protein; C-terminal domain of 1-Cys peroxiredoxin family protein.
  
  
 0.625
ahpC
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
  
 0.625
DR95_1925
Hypothetical protein.
  
    0.623
raiA
Ribosome-associated inhibitor A; yfiA: ribosomal subunit interface protein.
   
    0.540
raiA-2
Ribosome-associated inhibitor A.
   
    0.540
yqjC
Protein yqjC.
   
    0.527
ahpF
ahpF: alkyl hydroperoxide reductase subunit F.
  
  
 0.492
bolA
Protein BolA; Belongs to the BolA/IbaG family.
   
    0.469
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.