Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lrhATranscriptional regulator LrhA; Belongs to the LysR transcriptional regulatory family. (302 aa)    
Predicted Functional Partners:
lysR
Transcriptional activator protein lysR; Belongs to the LysR transcriptional regulatory family.
  
     0.763
DR95_1341
Bacterial regulatory helix-turn-helix, lysR family protein.
  
     0.748
gcvA_2
Bacterial regulatory helix-turn-helix, lysR family protein; Belongs to the LysR transcriptional regulatory family.
  
     0.741
dmlR_3
Hypothetical protein; Belongs to the LysR transcriptional regulatory family.
  
    0.706
dapAL
Putative dihydrodipicolinate synthetase; Belongs to the DapA family.
  
    0.570
allS_4
Bacterial regulatory helix-turn-helix, lysR family protein; Belongs to the LysR transcriptional regulatory family.
  
     0.555
cysB
HTH-type transcriptional regulator CysB; Belongs to the LysR transcriptional regulatory family.
  
     0.554
dmlR_6
Bacterial regulatory helix-turn-helix, lysR family protein; Belongs to the LysR transcriptional regulatory family.
  
    0.490
blaA
Bacterial regulatory helix-turn-helix, lysR family protein; Positive regulator of the expression of the gene (blaB) for beta-lactamase.
  
     0.487
lrp
Leucine-responsive regulatory protein.
   
  
 0.477
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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