STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsrA_1Sugar (and other) transporter family protein. (456 aa)    
Predicted Functional Partners:
DR95_1540
Hypothetical protein.
       0.800
DR95_3170
hlyD secretion family protein.
 
 
 0.773
emrA_1
8a0101: efflux pump membrane family protein.
 
 
 0.760
DR95_3169
Major Facilitator Superfamily protein.
  
     0.692
dmlR_5
Bacterial regulatory helix-turn-helix, lysR family protein; Belongs to the LysR transcriptional regulatory family.
 
   
 0.607
mdtL
efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily protein.
  
     0.489
DR95_877
RND_mfp: efflux transporter, RND family, MFP subunit.
  
 
 0.482
emrD
Multidrug resistance protein D.
  
   
 0.435
ydhC_3
efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily protein.
  
   
 0.428
tolR
Protein tolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. Required, with TolQ, for the proton motive force-dependent activation of TolA and for TolA-Pal interaction.
   
   0.414
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
Server load: low (32%) [HD]
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