Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
prsDtype_I_sec_PrtD: type I secretion system ATPase family protein. (579 aa)    
Predicted Functional Partners:
prsE
type_I_hlyD: type I secretion membrane fusion, HlyD family protein.
 
  
 0.983
tolC_2
type_I_sec_TolC: type I secretion outer membrane, TolC family protein.
 
  
 0.933
prtA-2
Secreted protease A.
 
 
 0.873
prtA
Secreted protease A.
 
 
 0.826
prtA-3
Secreted protease A.
 
 
 0.777
hlyD
type_I_hlyD: type I secretion membrane fusion, HlyD family protein.
 
  
 0.722
pstB
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.618
DR95_3670
type_I_hlyD: type I secretion membrane fusion, HlyD family protein.
 
     0.559
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
      
 0.448
DR95_2075
Segment 14/17; Putative complete genome.
 
 
 0.432
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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