Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| dksA | gluQ | DR95_1716 | DR95_1717 | RNA polymerase-binding protein DksA; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.705 |
| dksA | mrcB | DR95_1716 | DR95_1713 | RNA polymerase-binding protein DksA; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.420 |
| dksA | sfsA | DR95_1716 | DR95_1715 | RNA polymerase-binding protein DksA; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | sfsA: sugar fermentation stimulation protein; Belongs to the SfsA family. | 0.635 |
| gluQ | dksA | DR95_1717 | DR95_1716 | queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | RNA polymerase-binding protein DksA; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | 0.705 |
| gluQ | sfsA | DR95_1717 | DR95_1715 | queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | sfsA: sugar fermentation stimulation protein; Belongs to the SfsA family. | 0.524 |
| hrpB | mrcB | DR95_1714 | DR95_1713 | DEAH_box_HrpB: ATP-dependent helicase HrpB. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.533 |
| hrpB | sfsA | DR95_1714 | DR95_1715 | DEAH_box_HrpB: ATP-dependent helicase HrpB. | sfsA: sugar fermentation stimulation protein; Belongs to the SfsA family. | 0.585 |
| mrcB | dksA | DR95_1713 | DR95_1716 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | RNA polymerase-binding protein DksA; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | 0.420 |
| mrcB | hrpB | DR95_1713 | DR95_1714 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | DEAH_box_HrpB: ATP-dependent helicase HrpB. | 0.533 |
| mrcB | sfsA | DR95_1713 | DR95_1715 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | sfsA: sugar fermentation stimulation protein; Belongs to the SfsA family. | 0.447 |
| mutY | sfsA | DR95_3666 | DR95_1715 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | sfsA: sugar fermentation stimulation protein; Belongs to the SfsA family. | 0.926 |
| proA | sfsA | DR95_3623 | DR95_1715 | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | sfsA: sugar fermentation stimulation protein; Belongs to the SfsA family. | 0.412 |
| sfsA | dksA | DR95_1715 | DR95_1716 | sfsA: sugar fermentation stimulation protein; Belongs to the SfsA family. | RNA polymerase-binding protein DksA; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | 0.635 |
| sfsA | gluQ | DR95_1715 | DR95_1717 | sfsA: sugar fermentation stimulation protein; Belongs to the SfsA family. | queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.524 |
| sfsA | hrpB | DR95_1715 | DR95_1714 | sfsA: sugar fermentation stimulation protein; Belongs to the SfsA family. | DEAH_box_HrpB: ATP-dependent helicase HrpB. | 0.585 |
| sfsA | mrcB | DR95_1715 | DR95_1713 | sfsA: sugar fermentation stimulation protein; Belongs to the SfsA family. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.447 |
| sfsA | mutY | DR95_1715 | DR95_3666 | sfsA: sugar fermentation stimulation protein; Belongs to the SfsA family. | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.926 |
| sfsA | proA | DR95_1715 | DR95_3623 | sfsA: sugar fermentation stimulation protein; Belongs to the SfsA family. | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.412 |