Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
uhpCRegulatory protein uhpC. (445 aa)    
Predicted Functional Partners:
uhpC_1
Major Facilitator Superfamily protein.
  
  
 
0.926
fbpA
Hypothetical protein.
 
    0.867
cysT_2
Binding--dependent transport system inner membrane component family protein.
 
    0.633
liaS
Histidine kinase family protein.
  
    0.581
uhpA
Bacterial regulatory s, luxR family protein.
  
  
 0.562
ugpC_2
ABC transporter family protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
     
 0.542
glpF
Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
 
  
 0.511
DR95_2359
Bacterial extracellular solute-binding family protein.
 
    0.437
glpA
glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.419
glpQ
Glycerophosphoryl diester phosphodiesterase.
  
  
 0.410
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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