STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbpAHypothetical protein. (343 aa)    
Predicted Functional Partners:
cysT_2
Binding--dependent transport system inner membrane component family protein.
 
 
 0.991
ugpC_2
ABC transporter family protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
 
 
 0.958
uhpC
Regulatory protein uhpC.
 
    0.863
DR95_595
Binding--dependent transport system inner membrane component family protein.
 
  
 0.740
DR95_2359
Bacterial extracellular solute-binding family protein.
  
     0.726
thiP
thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein.
 
  
 0.685
liaS
Histidine kinase family protein.
 
   
 0.613
DR95_3501
Hypothetical protein; Cobalamin-independent synthase, N-terminal domain protein.
      
 0.565
metE
5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
      
 0.565
uhpA
Bacterial regulatory s, luxR family protein.
       0.550
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.