ugpC_2 protein (Proteus vulgaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ugpC_2

ABC transporter family protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system. (346 aa)

Predicted Functional Partners:

cysT_2

0.987

ydcV

0.955

fbpA

0.952

potB

0.949

oppD_3

0.844

potD

0.806

oppD_1

0.659

DR95_595

0.656

cydD

0.567

uhpC

0.542

Your Current Organism:

Proteus vulgaris

NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR95_595	fbpA	DR95_595	DR95_1726	Binding--dependent transport system inner membrane component family protein.	Hypothetical protein.	0.685
DR95_595	ugpC_2	DR95_595	DR95_1728	Binding--dependent transport system inner membrane component family protein.	ABC transporter family protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	0.656
cydD	ugpC_2	DR95_1417	DR95_1728	cydD: thiol reductant ABC exporter, CydD subunit.	ABC transporter family protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	0.567
cysT_2	fbpA	DR95_1727	DR95_1726	Binding--dependent transport system inner membrane component family protein.	Hypothetical protein.	0.989
cysT_2	ugpC_2	DR95_1727	DR95_1728	Binding--dependent transport system inner membrane component family protein.	ABC transporter family protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	0.987
cysT_2	uhpC	DR95_1727	DR95_1725	Binding--dependent transport system inner membrane component family protein.	Regulatory protein uhpC.	0.633
fbpA	DR95_595	DR95_1726	DR95_595	Hypothetical protein.	Binding--dependent transport system inner membrane component family protein.	0.685
fbpA	cysT_2	DR95_1726	DR95_1727	Hypothetical protein.	Binding--dependent transport system inner membrane component family protein.	0.989
fbpA	ugpC_2	DR95_1726	DR95_1728	Hypothetical protein.	ABC transporter family protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	0.952
fbpA	uhpC	DR95_1726	DR95_1725	Hypothetical protein.	Regulatory protein uhpC.	0.867
oppD_1	ugpC_2	DR95_997	DR95_1728	Hypothetical protein; oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein; Belongs to the ABC transporter superfamily.	ABC transporter family protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	0.659
oppD_3	ugpC_2	DR95_635	DR95_1728	ABC transporter family protein.	ABC transporter family protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	0.844
potB	potD	DR95_2182	DR95_2184	Binding--dependent transport system inner membrane component family protein.	Bacterial extracellular solute-binding family protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	0.998
potB	ugpC_2	DR95_2182	DR95_1728	Binding--dependent transport system inner membrane component family protein.	ABC transporter family protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	0.949
potB	ydcV	DR95_2182	DR95_2183	Binding--dependent transport system inner membrane component family protein.	Binding--dependent transport system inner membrane component family protein.	0.999
potD	potB	DR95_2184	DR95_2182	Bacterial extracellular solute-binding family protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Binding--dependent transport system inner membrane component family protein.	0.998
potD	ugpC_2	DR95_2184	DR95_1728	Bacterial extracellular solute-binding family protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	ABC transporter family protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	0.806
potD	ydcV	DR95_2184	DR95_2183	Bacterial extracellular solute-binding family protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Binding--dependent transport system inner membrane component family protein.	0.999
ugpC_2	DR95_595	DR95_1728	DR95_595	ABC transporter family protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	Binding--dependent transport system inner membrane component family protein.	0.656
ugpC_2	cydD	DR95_1728	DR95_1417	ABC transporter family protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	cydD: thiol reductant ABC exporter, CydD subunit.	0.567

page 1 of 2

Server load: low (40%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Co-occurrence

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About