Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR95_1153 | DR95_1730 | DR95_1153 | DR95_1730 | tape_meas_lam_C: phage tail tape measure protein, lambda family. | tonB-dependent Receptor Plug domain protein. | 0.724 |
DR95_1153 | DR95_1903 | DR95_1153 | DR95_1903 | tape_meas_lam_C: phage tail tape measure protein, lambda family. | rTX-family protein. | 0.777 |
DR95_1153 | DR95_2431 | DR95_1153 | DR95_2431 | tape_meas_lam_C: phage tail tape measure protein, lambda family. | Autotransporter beta-domain protein. | 0.768 |
DR95_1153 | DR95_3673 | DR95_1153 | DR95_3673 | tape_meas_lam_C: phage tail tape measure protein, lambda family. | Bacterial Ig-like domain family protein. | 0.775 |
DR95_1153 | fpvA | DR95_1153 | DR95_1918 | tape_meas_lam_C: phage tail tape measure protein, lambda family. | Hypothetical protein; Secretin and TonB N terminus short domain protein. | 0.730 |
DR95_1153 | ompC | DR95_1153 | DR95_1862 | tape_meas_lam_C: phage tail tape measure protein, lambda family. | Gram-negative porin family protein. | 0.771 |
DR95_1153 | yadA_1 | DR95_1153 | DR95_256 | tape_meas_lam_C: phage tail tape measure protein, lambda family. | Coiled stalk of trimeric autotransporter adhesin family protein. | 0.726 |
DR95_1729 | DR95_1730 | DR95_1729 | DR95_1730 | tonB dependent receptor family protein. | tonB-dependent Receptor Plug domain protein. | 0.834 |
DR95_1729 | DR95_1903 | DR95_1729 | DR95_1903 | tonB dependent receptor family protein. | rTX-family protein. | 0.533 |
DR95_1729 | DR95_1917 | DR95_1729 | DR95_1917 | tonB dependent receptor family protein. | fecR family protein. | 0.797 |
DR95_1729 | DR95_2431 | DR95_1729 | DR95_2431 | tonB dependent receptor family protein. | Autotransporter beta-domain protein. | 0.564 |
DR95_1729 | fpvA | DR95_1729 | DR95_1918 | tonB dependent receptor family protein. | Hypothetical protein; Secretin and TonB N terminus short domain protein. | 0.571 |
DR95_1729 | yadA_1 | DR95_1729 | DR95_256 | tonB dependent receptor family protein. | Coiled stalk of trimeric autotransporter adhesin family protein. | 0.522 |
DR95_1730 | DR95_1153 | DR95_1730 | DR95_1153 | tonB-dependent Receptor Plug domain protein. | tape_meas_lam_C: phage tail tape measure protein, lambda family. | 0.724 |
DR95_1730 | DR95_1729 | DR95_1730 | DR95_1729 | tonB-dependent Receptor Plug domain protein. | tonB dependent receptor family protein. | 0.834 |
DR95_1730 | DR95_1903 | DR95_1730 | DR95_1903 | tonB-dependent Receptor Plug domain protein. | rTX-family protein. | 0.823 |
DR95_1730 | DR95_1917 | DR95_1730 | DR95_1917 | tonB-dependent Receptor Plug domain protein. | fecR family protein. | 0.774 |
DR95_1730 | DR95_2431 | DR95_1730 | DR95_2431 | tonB-dependent Receptor Plug domain protein. | Autotransporter beta-domain protein. | 0.799 |
DR95_1730 | DR95_2791 | DR95_1730 | DR95_2791 | tonB-dependent Receptor Plug domain protein. | tape_meas_lam_C: phage tail tape measure protein, lambda family. | 0.725 |
DR95_1730 | DR95_3673 | DR95_1730 | DR95_3673 | tonB-dependent Receptor Plug domain protein. | Bacterial Ig-like domain family protein. | 0.751 |
page 1 of 5