Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
priCPrimosomal replication priB and priC family protein. (180 aa)    
Predicted Functional Partners:
DR95_1786
Hypothetical protein.
     
 0.829
cpxP
LTXXQ motif family protein.
  
     0.769
DR95_3299
Hypothetical protein; Opacity-associated A N-terminal motif family protein.
  
     0.768
DR95_1543
cyd_oper_ybgE: cyd operon protein YbgE.
  
     0.760
mlaB
STAS domain protein.
  
     0.758
DR95_961
Hypothetical protein.
  
     0.754
DR95_2705
HAMP domain protein.
  
     0.753
priB
Primosomal replication protein n; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family.
  
   
 0.753
zapC
Hypothetical protein; Contributes to the efficiency of the cell division process by stabilizing the polymeric form of the cell division protein FtsZ. Acts by promoting interactions between FtsZ protofilaments and suppressing the GTPase activity of FtsZ.
  
     0.747
atpI
ATP synthase I chain family protein.
  
     0.747
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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