Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ulaBPTS system, Lactose/Cellobiose specific IIB subunit. (95 aa)    
Predicted Functional Partners:
ulaA
PTS system sugar-specific permease component family protein.
 
 
 0.996
ulaC
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein.
 
 
 0.995
ptsH
Phosphocarrier protein HPr.
    
 0.905
bglF
PTS system beta-glucoside-specific EIIBCA component.
 
   
 0.561
nagE
PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component.
     
 0.487
gntR_1
Periplasmic binding s and sugar binding domain of LacI family protein.
       0.419
nfuA
fe/S biogenesis protein nfuA; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
      
 0.401
DR95_3550
Phosphotransferase system, EIIB family protein.
  
   
 0.401
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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