STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tsaA_1Hypothetical protein; C-terminal domain of 1-Cys peroxiredoxin family protein. (200 aa)    
Predicted Functional Partners:
ykuV
ahpC/TSA family protein.
  
 0.926
trxB
TRX_reduct: thioredoxin-disulfide reductase.
  
 
 0.890
ahpF
ahpF: alkyl hydroperoxide reductase subunit F.
  
  
 0.817
katA
Catalase; Belongs to the catalase family.
  
 
 0.704
norV
Anaerobic nitric oxide reductase flavorubredoxin.
  
  
 0.632
dps
DNA protection during starvation protein; Belongs to the Dps family.
  
  
 0.625
fur
Ferric uptake regulation protein; Belongs to the Fur family.
  
  
 0.622
ftnA
Ferritin-like domain protein; Iron-storage protein.
  
  
 0.552
zur
Ferric uptake regulator family protein; Belongs to the Fur family.
  
  
 0.516
grpE
grpE family protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depe [...]
   
 
 0.487
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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