STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR95_1865Hypothetical protein. (408 aa)    
Predicted Functional Partners:
tusA_1
Hypothetical protein; Belongs to the sulfur carrier protein TusA family.
 
  
 0.993
DR95_857
lacY proton/sugar symporter family protein.
  
     0.650
DR95_2253
mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein.
  
     0.578
ychN
Protein ychN.
 
    0.577
dmsC_1
DMSO reductase anchor subunit family protein.
  
     0.511
DR95_1927
yqjK-like family protein.
  
     0.448
hypE
hypE: hydrogenase expression/formation protein HypE.
       0.440
tusA
Sulfurtransferase tusA; Sulfur carrier protein involved in sulfur trafficking in the cell. Part of a sulfur-relay system required for 2-thiolation during synthesis of 2-thiouridine of the modified wobble base 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) in tRNA. Interacts with IscS and stimulates its cysteine desulfurase activity. Accepts an activated sulfur from IscS, which is then transferred to TusD, and thus determines the direction of sulfur flow from IscS to 2-thiouridine formation. Also appears to be involved in sulfur transfer for the biosynthesis of molybdopterin.
  
  
 0.438
DR95_3429
Hypothetical protein.
  
     0.429
ycdZ
Inner membrane protein ycdZ.
  
     0.403
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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