STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hypBhypB: hydrogenase accessory protein HypB. (387 aa)    
Predicted Functional Partners:
hypD
hypD: hydrogenase expression/formation protein HypD; Belongs to the HypD family.
 
  
 0.980
hypC
hypC_hupF: hydrogenase assembly chaperone HypC/HupF.
 
  
 0.973
hyfG
Hydrogenase-4 component G.
   
 
 0.970
ureF
Urease accessory protein ureF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
  
 
 0.943
hypE
hypE: hydrogenase expression/formation protein HypE.
 
  
 0.936
hybO
Hydrogenase-2 small chain.
 
  
 0.936
hybC
Hydrogenase-2 large chain; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
  
 0.919
hypA
Hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
 
 0.917
hybD
hupD: hydrogenase expression/formation protein.
 
  
 0.913
hypC-2
hypC_hupF: hydrogenase assembly chaperone HypC/HupF; Belongs to the HupF/HypC family.
 
  
 0.898
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.