STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR95_1915Hypothetical protein; tonB_Cterm: TonB family C-terminal domain protein. (265 aa)    
Predicted Functional Partners:
DR95_496
tonB dependent receptor family protein.
 
 
 0.877
DR95_3138
tonB dependent receptor family protein.
 
 
 0.863
fpvA
Hypothetical protein; Secretin and TonB N terminus short domain protein.
 
 
 0.806
DR95_1917
fecR family protein.
 
  
 0.780
tdhA
tonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein.
 
 
 0.752
exbD
exbD_1: TonB system transport protein ExbD.
 
 
 0.749
DR95_1048
tonB-hemin: TonB-dependent heme/hemoglobin receptor family protein.
 
 
 0.734
exbB
exbB: tonB-system energizer ExbB.
 
 
 0.727
btuB
TonB-dependent vitamin B12 receptor; Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans- periplasmic membrane protein TonB; Belongs to the TonB-dependent receptor family. BtuB (TC 1.B.14.3.1) subfamily.
   
 
 0.721
lpp
Lipoleucine-zipper family protein.
    
   0.691
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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