rsmI protein (Proteus vulgaris) - STRING interaction network

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rsmI

Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. (292 aa)

Predicted Functional Partners:

rpsU

0.714

rpsQ

0.709

rpsB

0.686

rpsD

0.679

rpsN

0.669

rpsR

0.665

rpsF

0.654

rpsP

0.652

lpoA

0.650

yfiC_1

0.648

Your Current Organism:

Proteus vulgaris

NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
lpoA	rsmI	DR95_1944	DR95_1943	lppC lipofamily protein.	Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.	0.650
rpsB	rpsD	DR95_2486	DR95_2119	rpsB_bact: ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.999
rpsB	rpsF	DR95_2486	DR95_3303	rpsB_bact: ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.999
rpsB	rpsN	DR95_2486	DR95_2130	rpsB_bact: ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal S14p/S29e family protein; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.998
rpsB	rpsP	DR95_2486	DR95_3604	rpsB_bact: ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	S16: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.999
rpsB	rpsQ	DR95_2486	DR95_2134	rpsB_bact: ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.999
rpsB	rpsR	DR95_2486	DR95_3301	rpsB_bact: ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.998
rpsB	rpsU	DR95_2486	DR95_2406	rpsB_bact: ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	S21p: ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.992
rpsB	rsmI	DR95_2486	DR95_1943	rpsB_bact: ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.	0.686
rpsD	rpsB	DR95_2119	DR95_2486	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	rpsB_bact: ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.999
rpsD	rpsF	DR95_2119	DR95_3303	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.997
rpsD	rpsN	DR95_2119	DR95_2130	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	Ribosomal S14p/S29e family protein; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.999
rpsD	rpsP	DR95_2119	DR95_3604	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	S16: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.996
rpsD	rpsQ	DR95_2119	DR95_2134	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.999
rpsD	rpsR	DR95_2119	DR95_3301	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.996
rpsD	rpsU	DR95_2119	DR95_2406	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	S21p: ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.972
rpsD	rsmI	DR95_2119	DR95_1943	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.	0.679
rpsF	rpsB	DR95_3303	DR95_2486	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	rpsB_bact: ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.999
rpsF	rpsD	DR95_3303	DR95_2119	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.997
rpsF	rpsN	DR95_3303	DR95_2130	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	Ribosomal S14p/S29e family protein; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.998

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