STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arcBAerobic respiration control sensor protein ArcB. (778 aa)    
Predicted Functional Partners:
rcsC
Sensor kinase protein RcsC; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB.
 
 
0.999
arcA
Response regulator.
 0.997
rcsD
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein.
 
 
0.997
hnr
Protein hnr.
 
 
 0.996
envZ
Osmolarity sensor protein envZ.
 
0.984
cpxA
Sensor protein CpxA.
 
0.983
phoQ
Virulence sensor histidine kinase phoQ.
 
 
 0.982
rssA
Swarming motility regulation sensor protein rssA.
 
 
0.981
glrK
Putative sensor-like histidine kinase yfhK.
 
 
0.979
pspC
phageshock_pspC: phage shock protein C.
   
 
 0.967
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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