Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mlaDPutative phospholipid ABC transporter-binding protein mlaD. (178 aa)    
Predicted Functional Partners:
mlaC
Putative phospholipid-binding protein mlaC.
 
 0.999
mlaE
Putative phospholipid ABC transporter permease protein mlaE.
 
 0.999
mlaF
Putative phospholipid import ATP-binding protein MlaF.
 
 0.999
mlaB
STAS domain protein.
  
 0.980
mlaA
Putative phospholipid-binding lipoprotein mlaA.
 
   
 0.882
motB
Motility protein B.
 
 
   0.621
kdsC
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.
 
    0.584
kdsD
Putative isomerase.
       0.581
yrbG
Sodium/calcium exchanger family protein.
       0.573
DR95_1976
bolA-like family protein; Belongs to the BolA/IbaG family.
     
 0.559
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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