STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mlaEPutative phospholipid ABC transporter permease protein mlaE. (259 aa)    
Predicted Functional Partners:
mlaF
Putative phospholipid import ATP-binding protein MlaF.
 
 0.999
mlaD
Putative phospholipid ABC transporter-binding protein mlaD.
 
 
 0.998
mlaC
Putative phospholipid-binding protein mlaC.
 
 
 0.969
mlaB
STAS domain protein.
  
 
 0.735
kdsD
Putative isomerase.
 
     0.615
mlaA
Putative phospholipid-binding lipoprotein mlaA.
 
   
 0.574
lptB
Lipopolysaccharide export system ATP-binding protein LptB.
 
     0.537
yrbG
Sodium/calcium exchanger family protein.
       0.524
msbA
Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
 
 
 0.509
lptC
Lipopolysaccharide export system protein lptC; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA. Belongs to the LptC family.
     
 0.500
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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