STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
narXNitrate/nitrite sensor protein narX. (601 aa)    
Predicted Functional Partners:
narL
Bacterial regulatory s, luxR family protein.
 
 0.996
degU
Bacterial regulatory s, luxR family protein.
 
 
 0.869
uhpA
Bacterial regulatory s, luxR family protein.
 
 
 0.805
uvrY
Response regulator.
 
 
 0.740
narK
Nitrite extrusion protein 1.
 
  
 0.686
rcsB
Capsular synthesis regulator component B; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsB is the response regulator that binds to regulatory DNA regions.
 
 
 0.684
narJ
narJ: nitrate reductase molybdenum cofactor assembly chaperone.
 
   
 0.668
narG
narG: nitrate reductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.615
narI
narI: respiratory nitrate reductase, gamma subunit.
 
  
 0.611
narH
narH: nitrate reductase, beta subunit.
 
  
 0.577
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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