Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pxpAlamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (261 aa)    
Predicted Functional Partners:
DR95_2092
Hypothetical protein.
  
 0.999
DR95_2093
Hypothetical protein; Belongs to the D-glutamate cyclase family.
 
    0.966
DR95_2095
Natural resistance-associated macrophage family protein.
 
  
 0.966
ggt
G_glut_trans: gamma-glutamyltransferase.
     
  0.900
gshA
Glu_cys_ligase: glutamate--cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
     
  0.900
glnA
glnA: glutamine synthetase, type I.
   
 
  0.804
gdhA
NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
  0.802
gltB
Glutamine amidotransferases class-II family protein.
     
  0.800
gltD
Glutamate synthase [NADPH] small chain.
     
  0.800
glsA
Gln_ase: glutaminase A; Belongs to the glutaminase family.
     
  0.800
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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