STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR95_2095Natural resistance-associated macrophage family protein. (416 aa)    
Predicted Functional Partners:
DR95_2092
Hypothetical protein.
 
  
 0.982
pxpA
lamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
  
 0.960
DR95_2093
Hypothetical protein; Belongs to the D-glutamate cyclase family.
 
    0.957
accC_2
D-ala D-ala ligase family protein.
       0.729
dmsC_3
DMSO reductase anchor subunit family protein.
      
 0.565
mntB_2
ABC 3 transport family protein.
   
  
 0.518
mntB_3
ABC 3 transport family protein.
   
  
 0.518
znuB
High-affinity zinc uptake system membrane protein znuB.
   
  
 0.518
copA
ATPase-IB1_Cu: copper-translocating P-type ATPase.
  
 
 0.511
aroE
Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
     
 0.509
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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